Merge release/v2.5.0
CI / test (push) Failing after 3s

Co-Authored-By: Claude Opus 5 (1M context) <[email protected]>
This commit is contained in:
osobh
2026-09-19 18:25:26 -07:00
co-authored by Claude Opus 5
20 changed files with 66 additions and 47 deletions
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# Changelog
## Unreleased
## v2.5.0 (2026-09-19)
### Upgrade Notes
- **Retrieval rankings change, for the better.** The default fusion weights
move from `0.7/0.3` to `0.4/0.6` (`hybrid::DEFAULT_FUSION`), measured over the
full LongMemEval haystack: turn-level Hit@1 51.6% vs 44.2%, MRR 0.643 vs
0.586. `unified_search` and the OpenClaw backend pick this up automatically;
callers passing weights to `hybrid_search` explicitly are unaffected.
- **Out-of-range selections are now errors.** `read_*_selection` used to return
data for a selection that ran past a dataset edge — a hyperslab came back
zero-padded, and a point with an out-of-range coordinate wrapped into the
next row. Both are now `FormatError::SelectionOutOfBounds`. Code relying on
the old (wrong) values will start seeing errors.
- **Large compressed datasets written without explicit chunk dimensions get a
different layout.** They used to be stored as one chunk; they are now split
to ~1 MiB chunks. The files stay standard and h5py-readable, and explicit
`with_chunks` is unaffected.
- `rayon` is now a default dependency of `clawhdf5-agent` (the parallel index
build). Opt out with `--no-default-features --features float16,hnsw`.
- `clawhdf5-ann` search results no longer shrink when records near the query
have been deleted, so a search that previously returned fewer than `k`
results now returns `k`.
### Retrieval quality
- `clawhdf5-agent`: optional keyword stemming — `bm25::TokenFilter::Stemmed`
@@ -39,8 +60,6 @@
never been measured against the weighted sum; the LongMemEval bench now has
an `RRF` mode.
## Unreleased
### HDF5 Read Path
- **Selection reads cost what the selection costs.** `read_*_selection` decoded
the *entire* dataset and then picked elements out, so a 64 x 64 window of a
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@@ -21,7 +21,7 @@ members = [
resolver = "2"
[workspace.package]
version = "2.4.0"
version = "2.5.0"
edition = "2024"
license = "MIT"
repository = "https://git.redclaw.dev/quantumclaw/clawhdf5"
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[package]
name = "clawhdf5-accel"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "SIMD-accelerated operations for rustyhdf5"
license = "MIT"
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[package]
name = "clawhdf5-agent"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "HDF5-backed persistent memory store for on-device AI agents"
license = "MIT"
@@ -10,12 +10,12 @@ keywords = ["agent", "memory", "hdf5", "vector-search", "embedding"]
categories = ["database", "science", "algorithms"]
[dependencies]
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0", features = ["parallel", "fast-checksum"] }
clawhdf5 = { path = "../clawhdf5", version = "2.4.0" }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.4.0", features = ["mmap"] }
clawhdf5-accel = { path = "../clawhdf5-accel", version = "2.4.0" }
clawhdf5-ann = { path = "../clawhdf5-ann", version = "2.4.0", optional = true }
clawhdf5-gpu = { path = "../clawhdf5-gpu", version = "2.4.0", optional = true, default-features = false }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0", features = ["parallel", "fast-checksum"] }
clawhdf5 = { path = "../clawhdf5", version = "2.5.0" }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.5.0", features = ["mmap"] }
clawhdf5-accel = { path = "../clawhdf5-accel", version = "2.5.0" }
clawhdf5-ann = { path = "../clawhdf5-ann", version = "2.5.0", optional = true }
clawhdf5-gpu = { path = "../clawhdf5-gpu", version = "2.5.0", optional = true, default-features = false }
serde = { workspace = true }
byteorder = "1"
half = { workspace = true, optional = true }
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[package]
name = "clawhdf5-android"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Android JNI bridge for edgehdf5-memory HDF5 backend"
license = "MIT"
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[package]
name = "clawhdf5-ann"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "HNSW approximate nearest neighbor index stored as HDF5"
license = "MIT"
@@ -10,9 +10,9 @@ keywords = ["hdf5", "ann", "hnsw", "nearest-neighbor"]
categories = ["algorithms", "science"]
[dependencies]
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0" }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.4.0" }
clawhdf5-accel = { path = "../clawhdf5-accel", version = "2.4.0" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0" }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.5.0" }
clawhdf5-accel = { path = "../clawhdf5-accel", version = "2.5.0" }
rayon = { version = "1", optional = true }
[features]
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[package]
name = "clawhdf5-bench"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Benchmark harnesses for clawhdf5-agent (Track 8)"
license = "MIT"
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[package]
name = "clawhdf5-cli"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
license = "MIT"
description = "CLI for clawhdf5 agent memory — create, save, search, recall, stats"
@@ -14,7 +14,7 @@ name = "clawhdf5"
path = "src/main.rs"
[dependencies]
clawhdf5-agent = { path = "../clawhdf5-agent", version = "2.4.0" }
clawhdf5-agent = { path = "../clawhdf5-agent", version = "2.5.0" }
clap = { version = "4", features = ["derive", "env"] }
serde_json = "1"
serde = { workspace = true }
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[package]
name = "clawhdf5-derive"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Derive macros for rustyhdf5 HDF5 traits"
license = "MIT"
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[package]
name = "clawhdf5-filters"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Filter and compression pipeline for clawhdf5"
license = "MIT"
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[package]
name = "clawhdf5-format"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Pure-Rust HDF5 binary format parsing and writing — no C dependencies"
license = "MIT"
@@ -25,7 +25,7 @@ pco = { version = "1.0", optional = true }
[dev-dependencies]
serde_json = "1"
criterion = { workspace = true }
clawhdf5-derive = { path = "../clawhdf5-derive", version = "2.4.0" }
clawhdf5-derive = { path = "../clawhdf5-derive", version = "2.5.0" }
[[bench]]
name = "bench"
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[package]
name = "clawhdf5-gpu"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "GPU-accelerated vector operations for rustyhdf5 using wgpu compute shaders"
license = "MIT"
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[package]
name = "clawhdf5-io"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "I/O abstraction layer for rustyhdf5"
license = "MIT"
@@ -10,7 +10,7 @@ keywords = ["hdf5", "io", "science", "data"]
categories = ["filesystem", "science"]
[dependencies]
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0" }
memmap2 = { version = "0.9", optional = true }
libc = { version = "0.2", optional = true }
tokio = { version = "1", features = ["fs", "io-util"], optional = true }
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[package]
name = "clawhdf5-migrate"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "CLI to migrate SQLite agent memory databases to HDF5 format"
license = "MIT"
@@ -14,9 +14,9 @@ name = "clawhdf5-migrate"
path = "src/main.rs"
[dependencies]
clawhdf5-agent = { path = "../clawhdf5-agent", version = "2.4.0" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0" }
clawhdf5 = { path = "../clawhdf5", version = "2.4.0" }
clawhdf5-agent = { path = "../clawhdf5-agent", version = "2.5.0" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0" }
clawhdf5 = { path = "../clawhdf5", version = "2.5.0" }
rusqlite = { version = "0.31", features = ["bundled"] }
clap = { version = "4", features = ["derive"] }
half = { workspace = true }
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@@ -1,6 +1,6 @@
[package]
name = "clawhdf5-napi"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Node.js native addon (napi-rs) exposing clawhdf5-agent to TypeScript/JavaScript"
license = "MIT"
@@ -10,7 +10,7 @@ repository = "https://git.redclaw.dev/quantumclaw/clawhdf5"
crate-type = ["cdylib"]
[dependencies]
clawhdf5-agent = { path = "../clawhdf5-agent", version = "2.4.0" }
clawhdf5-agent = { path = "../clawhdf5-agent", version = "2.5.0" }
napi = { version = "2", default-features = false, features = ["napi9"] }
napi-derive = "2"
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@@ -1,6 +1,6 @@
[package]
name = "clawhdf5-netcdf4"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "NetCDF-4 read support built on rustyhdf5 — pure Rust, no C dependencies"
license = "MIT"
@@ -10,8 +10,8 @@ keywords = ["netcdf", "netcdf4", "hdf5", "science", "climate"]
categories = ["parser-implementations", "science"]
[dependencies]
clawhdf5 = { path = "../clawhdf5", version = "2.4.0" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0" }
clawhdf5 = { path = "../clawhdf5", version = "2.5.0" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0" }
[dev-dependencies]
tempfile = { workspace = true }
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@@ -1,6 +1,6 @@
[package]
name = "clawhdf5-py"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Python bindings for rustyhdf5 — a pure-Rust HDF5 library"
license = "MIT"
@@ -14,8 +14,8 @@ name = "clawhdf5"
crate-type = ["cdylib", "rlib"]
[dependencies]
clawhdf5_rs = { path = "../clawhdf5", version = "2.4.0", package = "clawhdf5" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0" }
clawhdf5_rs = { path = "../clawhdf5", version = "2.5.0", package = "clawhdf5" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0" }
pyo3 = "0.29"
numpy = "0.29"
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@@ -4,7 +4,7 @@ build-backend = "maturin"
[project]
name = "rustyhdf5"
version = "2.4.0"
version = "2.5.0"
description = "Python bindings for rustyhdf5 — a pure-Rust HDF5 library"
requires-python = ">=3.8"
license = { text = "MIT" }
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@@ -1,6 +1,6 @@
[package]
name = "clawhdf5"
version = "2.4.0"
version = "2.5.0"
edition = "2024"
description = "Pure-Rust HDF5 reader/writer — no C dependencies"
license = "MIT"
@@ -10,16 +10,16 @@ keywords = ["hdf5", "science", "data", "binary"]
categories = ["parser-implementations", "science", "encoding"]
[dependencies]
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0" }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.4.0" }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0" }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.5.0" }
rayon = { version = "1", optional = true }
[dev-dependencies]
tempfile = { workspace = true }
criterion = { workspace = true }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.4.0", features = ["mmap"] }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.4.0", features = ["parallel", "fast-checksum"] }
clawhdf5-filters = { path = "../clawhdf5-filters", version = "2.4.0" }
clawhdf5-io = { path = "../clawhdf5-io", version = "2.5.0", features = ["mmap"] }
clawhdf5-format = { path = "../clawhdf5-format", version = "2.5.0", features = ["parallel", "fast-checksum"] }
clawhdf5-filters = { path = "../clawhdf5-filters", version = "2.5.0" }
[[bench]]
name = "mmap_bench"
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{
"name": "@redclaw/clawhdf5",
"version": "2.4.0",
"version": "2.5.0",
"description": "Node.js bindings for clawhdf5 — HDF5-backed agent memory with hippocampal consolidation",
"main": "index.js",
"types": "index.d.ts",