Files
clawhdf5/crates/clawhdf5-format
osobhandClaude Opus 5.5 989335b67b fix(format): bound a Blosc2 frame's offsets chunk by the HDF5 chunk size
parse_frame sized the offsets chunk from the frame header's own nbytes and
chunksize, so a 173-byte frame declaring 32 Mi chunks, with a 40-byte
repeated-value offsets chunk, built 256 MiB (up to 2 GiB) of offsets for a
1 MiB HDF5 chunk and then returned 4 bytes. The offsets chunk is now capped
at the output limit (at least 128 bytes); a frame whose nbytes/chunksize
imply more chunks than that is refused before anything is allocated.

tests/blosc2_alloc_bounds.rs measures peak allocation with a counting
global allocator; the reviewer's frame failed it (decoded Ok(4)) before.

Co-Authored-By: Claude Opus 5.5 (1M context) <[email protected]>
2026-09-26 11:26:28 -05:00
..

clawhdf5-format

crates.io docs.rs

Pure-Rust HDF5 binary format parsing and writing — no C dependencies.

Features

  • Zero-copy superblock, object header, and B-tree parsing
  • Chunked dataset read/write with filter pipelines
  • no_std support (disable std feature)
  • Optional parallel reads via Rayon
  • SHA-256 provenance tracking

Usage

use clawhdf5_format::Superblock;

let data = std::fs::read("data.h5").unwrap();
let sb = Superblock::from_bytes(&data).unwrap();
println!("HDF5 version {}.{}", sb.version_major(), sb.version_minor());

License

MIT