Range reads M0/M1 (indexed lookups, Storage trait), ZFP, in-place editing #17
@@ -111,17 +111,24 @@ pub fn dataset_fill_value(messages: &[HeaderMessage]) -> Result<Option<Vec<u8>>,
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/// fill value message to where it lives: another object header, or the
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/// fill value message to where it lives: another object header, or the
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/// file's shared-message (SOHM) heap, as libhdf5 writes it when the file has
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/// file's shared-message (SOHM) heap, as libhdf5 writes it when the file has
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/// a SOHM index for fill values.
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/// a SOHM index for fill values.
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///
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pub fn dataset_fill_value_in(
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/// `file_data` is any [`Storage`](crate::storage::Storage): the file as a
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file_data: &[u8],
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/// `&[u8]`, or a backend that serves it by range. (The trait is not
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messages: &[HeaderMessage],
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/// imported here: its `len` would shadow the slice method in this module.)
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offset_size: u8,
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pub fn dataset_fill_value_in<S: crate::storage::Storage + ?Sized>(
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length_size: u8,
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file_data: &S,
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) -> Result<Option<Vec<u8>>, FormatError> {
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dataset_fill_value_from_storage(&file_data, messages, offset_size, length_size)
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}
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/// [`dataset_fill_value_in`] with the file behind any
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/// [`Storage`](crate::storage::Storage). (The trait is not imported here:
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/// its `len` would shadow the slice method in this module.)
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pub fn dataset_fill_value_from_storage(
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file: &dyn crate::storage::Storage,
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messages: &[HeaderMessage],
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messages: &[HeaderMessage],
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offset_size: u8,
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offset_size: u8,
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length_size: u8,
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length_size: u8,
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) -> Result<Option<Vec<u8>>, FormatError> {
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) -> Result<Option<Vec<u8>>, FormatError> {
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let file: &dyn crate::storage::Storage = &file_data;
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fill_value_from(messages, |msg| {
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fill_value_from(messages, |msg| {
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crate::shared_message::message_data_with_sohm_in(file, msg, offset_size, length_size)
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crate::shared_message::message_data_with_sohm_in(file, msg, offset_size, length_size)
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.map(|data| data.into_owned())
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.map(|data| data.into_owned())
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@@ -472,7 +479,7 @@ mod tests {
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.count();
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.count();
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let want = dataset_fill_value_in(file, &h.messages, os, ls);
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let want = dataset_fill_value_in(file, &h.messages, os, ls);
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assert_eq!(want, Ok(Some((-7i32).to_le_bytes().to_vec())));
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assert_eq!(want, Ok(Some((-7i32).to_le_bytes().to_vec())));
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let got = dataset_fill_value_in(&storage, &h.messages, os, ls);
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let got = dataset_fill_value_from_storage(&storage, &h.messages, os, ls);
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assert_eq!(got, want, "{}", child.name);
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assert_eq!(got, want, "{}", child.name);
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}
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}
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assert!(shared >= 2);
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assert!(shared >= 2);
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@@ -44,7 +44,7 @@ use clawhdf5_format::error::FormatError;
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use clawhdf5_format::extensible_array::{
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use clawhdf5_format::extensible_array::{
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ExtensibleArrayHeader, read_extensible_array_chunks, read_extensible_array_chunks_in,
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ExtensibleArrayHeader, read_extensible_array_chunks, read_extensible_array_chunks_in,
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};
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};
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use clawhdf5_format::fill_value::dataset_fill_value_in;
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use clawhdf5_format::fill_value::{dataset_fill_value_from_storage, dataset_fill_value_in};
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use clawhdf5_format::fixed_array::{
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use clawhdf5_format::fixed_array::{
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FixedArrayHeader, read_fixed_array_chunks, read_fixed_array_chunks_in,
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FixedArrayHeader, read_fixed_array_chunks, read_fixed_array_chunks_in,
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};
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};
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@@ -189,7 +189,7 @@ impl Walk<'_> {
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self.same(
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self.same(
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"fill value",
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"fill value",
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&want,
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&want,
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&dataset_fill_value_in(self.storage, &header.messages, os, ls),
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&dataset_fill_value_from_storage(self.st(), &header.messages, os, ls),
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);
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);
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for msg in &header.messages {
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for msg in &header.messages {
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