h5rs tools, browser reader, libhdf5 header checks, plugin filters, concurrency benchmark #14

Merged
osobh merged 60 commits from feat/p1-proof into main 2026-09-26 13:14:39 +00:00
2 changed files with 55 additions and 0 deletions
Showing only changes of commit 993214723e - Show all commits
@@ -421,6 +421,13 @@ impl ObjectHeader {
}; };
pos += msg_header_size; pos += msg_header_size;
// `end` is where the messages stop and the checksum starts.
// libhdf5 bounds a message by the chunk including its checksum,
// but a message that runs into the checksum still fails there:
// its loop stops at the checksum, and reading the checksum from
// past its start overruns the chunk ("ran off end of input
// buffer while decoding"). Both refuse it; only the text
// differs.
if msg_data_size > end - pos { if msg_data_size > end - pos {
return Err(FormatError::InvalidObjectHeader( return Err(FormatError::InvalidObjectHeader(
"message size exceeds buffer end", "message size exceeds buffer end",
@@ -252,6 +252,54 @@ for libver in ("earliest", "latest"):
} }
} }
/// A v2 object header message whose size runs past the messages into the
/// chunk's checksum is refused by libhdf5 whether it runs 1 byte or more
/// into the checksum (its loop stops at the checksum, and then the checksum
/// read and the size check fail), so it is refused here too.
#[test]
fn v2_header_message_running_into_the_checksum_is_refused() {
skip_if_no_python!();
let dir = tempfile::tempdir().unwrap();
let body = format!(
"{FIX_OHDR_PY}{}",
r#"
good = os.path.join(d, "good.h5")
with h5py.File(good, "w", libver="latest") as f:
f.create_dataset("d", data=np.arange(4, dtype="<i4"))
raw = bytearray(open(good, "rb").read())
off = raw.rfind(b"OHDR")
flags = raw[off + 5]; p = off + 6
if flags & 0x20: p += 16
if flags & 0x10: p += 4
width = 1 << (flags & 3)
end = p + width + int.from_bytes(raw[p:p + width], "little"); p += width
hdr = 6 if flags & 0x04 else 4
last = p
while p + hdr <= end:
last = p
p += hdr + int.from_bytes(raw[p + 1:p + 3], "little")
assert p == end
size = int.from_bytes(raw[last + 1:last + 3], "little")
for k in (1, 4, 5):
bad = bytearray(raw)
bad[last + 1:last + 3] = (size + k).to_bytes(2, "little")
fix_ohdr(bad, off)
open(os.path.join(d, f"into_checksum_{k}.h5"), "wb").write(bad)
"#
);
let verdicts = h5py_verdicts(dir.path(), &body);
assert_agrees_with_h5py(
dir.path(),
&verdicts,
&[
"good ok",
"into_checksum_1 ERROR",
"into_checksum_4 ERROR",
"into_checksum_5 ERROR",
],
);
}
#[test] #[test]
fn truncated_files_are_refused_and_nothing_past_the_end_of_file_is_read() { fn truncated_files_are_refused_and_nothing_past_the_end_of_file_is_read() {
skip_if_no_python!(); skip_if_no_python!();