Commit Graph
4 Commits
Author SHA1 Message Date
osobhandClaude Opus 5.5 dbafa952ac wasm: sizes a server or a dataset names are errors, not aborts
A read longer than isize::MAX (2 GiB on wasm32) aborted the module in
LazyStorage::assemble (capacity_overflow), taking every open file on the
page with it, and a hostile server only had to claim a large length and
serve a heap collection of 2 GiB + 4 KiB to get there (after fetching
2 GiB). Reading a large u8 dataset whole aborted the same way when its
values were widened to 64 bits.

- LazyConfig::max_fetch (openUrl option maxFetch, default 512 MiB, at
  most 1 GiB): a read longer than it fails at once, before anything is
  fetched, and an operation whose passes would fetch more than it fails
  before fetching (Operation::charge). assemble reserves fallibly.
- Reader::read refuses a read that would use more than 1 GiB while
  decoding (core::MAX_READ_BYTES: stored bytes + 64-bit values + result)
  with an error naming readHyperslab, before reading.
- openUrl refuses a file of 4 GiB or more at open on wasm32: the format
  code turns offsets into usize, so nothing past 4 GiB can be read there
  (shown by a new test: data at 3 GiB reads, a 4 GiB file is refused).
  maxDownload is bounded to 1 GiB.

Tests: make_fixture.py writes limits.h5 (a sparse 2^28 + 1024 byte u8
dataset), hostile_vl.h5 (the reviewer's collection) and far.h5 (data at
3 GiB); test.mjs (wasm32) and tests/lazy.rs (native) check each is an
error or reads, and that the module survives. Before: RuntimeError:
unreachable in Node; the native test read the huge dataset and fetched
2 GiB.

Co-Authored-By: Claude Opus 5.5 (1M context) <[email protected]>
2026-09-27 07:36:21 -05:00
osobhandClaude Opus 5.5 076feb089a wasm: restartable NeedBytes storage for lazy reads (range-read M4, core)
LazyStorage holds the blocks of a remote file fetched so far. An
operation runs as passes over it: a read that misses records the
missing blocks and fails, the pass's result is dropped whatever it is
(a parser may have caught the error and carried on), and the caller
fetches the reported ranges and re-runs the pass. No block is evicted
while an operation is in flight, so every pass that does not finish
asks for at least one new block and the operation ends. Blocks sit in
an LRU with a byte budget, trimmed between operations, bulk (raw data)
blocks first.

Reader::open_storage opens a file through any Storage, and variable-
length strings resolve through the file's storage instead of
File::as_bytes, which panics for a file not in memory.

tests/lazy.rs compares, file by file, what the viewer can show (kinds,
listings, attributes, info, whole reads and hyperslabs) read lazily
with the facade's range-storage path and the in-memory reader: files
built here at 512 B to 1 MiB blocks, the h5py/netCDF4 fixture, and with
CLAWHDF5_WASM_CORPUS the conformance corpus (656 files agree). A
listing plus a small read of a 48 MB file fetches 3 ranges.

Co-Authored-By: Claude Opus 5.5 (1M context) <[email protected]>
2026-09-27 06:35:21 -05:00
osobhandClaude Opus 5.5 d345ffbf80 fix(tools,wasm): resolve VL data through the library's VlResolver
h5rs (dump, ls, diff, check --data) kept its own lenient VL decoder:
a heap object longer than its element was cut to the element's length
(libhdf5 and h5py refuse it), a null string printed "" where h5dump
prints NULL, the stored element size was trusted, and every heap
collection was kept as an owned copy for the whole run. It now resolves
each element with VlResolver::element / string_element (new: one element
in place, borrowing from the file), and refuses a VL type whose stored
element size is not 4 + offset size + 4, as File does. H5::heap_object
and its cache are gone. h5diff compares a null VL string equal to an
empty one; so does h5rs diff.

clawhdf5-wasm already resolved VL strings with read_vl_strings; it now
uses VlResolver and checks the stored element size before reading, as
File::read_string does.

Tests (h5py writes the files, patched for "a\0b", a null element and
mis-sized heap objects, with 8- and 4-byte offsets):
- h5rs_interop dump_prints_vl_data_like_h5dump: byte-identical to h5dump;
- dump_json_vl_values_match_h5py: h5py's values, errors where h5py fails;
- check_data_flags_mis_sized_vl_heap_objects;
- clawhdf5-wasm tests/vl_strings.rs: wasm, File and h5py agree.
All four fail before. check --data over the 150 cve_hdf5 CVE and fuzzer
files now passes 15 (h5dump rejects 8 of them), was 16 and 9: the
stored-size check flags cve-2024-32608. h5rs-check-ok-files.sh --data:
0 of 422 flagged; h5rs-fuzz.sh: clean on 180 files.

Co-Authored-By: Claude Opus 5.5 (1M context) <[email protected]>
2026-09-26 09:04:21 -05:00
osobhandClaude Opus 5.5 a42b646689 feat(wasm): clawhdf5-wasm, the reader for JavaScript via wasm-bindgen
open(bytes) -> H5File with kind/list/info/attrs/attrErrors/read/
readHyperslab. Numeric data comes back in the typed array of the
stored width (Int16Array for i16, BigInt64Array for i64, Float32Array
for f32/f16, ...), strings and enum names as string arrays, array
datatypes flattened with their dims appended to the shape. Compound,
reference, opaque and VL-sequence datasets are refused with an error
naming the type; nothing is returned as reinterpreted bytes.

The logic is in a plain-Rust core module, tested natively: unit tests,
and h5py_interop, which compares every dataset, hyperslab, listing and
attribute of an h5py- and a netCDF4-written file with what libhdf5
reads back (generator shared with the Node test of the built package).

No mmap, no threads; lz4 is on, zstd/szip (C) are not. A
wasm-release profile (opt-level s, LTO) serves the browser build.
ci-test.sh lints the crate for wasm32 and checks it builds no C.

Co-Authored-By: Claude Opus 5.5 (1M context) <[email protected]>
2026-09-26 00:00:46 -05:00