Commit Graph
8 Commits
Author SHA1 Message Date
osobhandClaude Fable 5.1 4f2975d7e3 fix(agent): persist behavioural config; make compression actually work
Eight MemoryConfig fields (float16, compression, compression_level,
compact_threshold, hebbian_boost, decay_factor, wal_enabled, wal_max_entries)
were never written to /meta, so reopening a store silently reset them to
defaults — a compressed store was rewritten uncompressed by the first
checkpoint after a reopen, and wal_enabled=false flipped back to true. They
are now stored as /meta attributes; each is optional on load so older files
keep opening with the previous defaults, and non-finite floats are ignored.

Writing the round-trip test exposed that `compression = true` never worked in
a default build: the embeddings dataset called with_zstd() unconditionally but
the agent crate never enabled the zstd feature, so every checkpoint failed
with "unsupported filter: 32015". The default build now compresses with
deflate (always available, pure Rust path); Zstd is opt-in via a new `zstd`
agent feature.

Co-Authored-By: Claude Fable 5.1 <[email protected]>
2026-09-19 06:00:32 -07:00
osobhandClaude Fable 5.1 943b9141e3 fix(agent): crash between checkpoint and WAL truncate no longer duplicates entries
flush() writes the new .h5 and only then truncates the WAL. A crash in that
window left a .h5 that already contained the pending entries AND a WAL that
still listed them, and open() replayed the WAL unconditionally — every pending
entry came back twice.

A checkpoint now records a WalMark in /meta (wal_applied_len/wal_applied_crc):
the byte length and chained CRC of the WAL prefix it folded in. On open, if
the WAL's v3 CRC chain passes through exactly that position, the entries up to
it are skipped; otherwise (the normal case: the WAL was truncated) everything
is replayed. No WAL format change; files without the attributes behave as
before. WalFile tracks its chain length alongside running_crc and resumes both
on reopen.

Also make the checkpoint and snapshot durable as a unit: sync the temp file
before the rename and the parent directory after it, so a power loss can't
leave an empty or partial .h5 under the final name. This is per-checkpoint
cost only; individual WAL appends remain unsynced by design.

Co-Authored-By: Claude Fable 5.1 <[email protected]>
2026-09-19 05:42:10 -07:00
osobhandClaude Fable 5.1 a9f78ca5a1 fix(agent): validate per-record dataset lengths when loading a store
The norms guard was the tautology `n.len() == n.len()`, so a norms dataset
of any length was trusted and corrupted every cosine score; other per-record
datasets were not length-checked at all, so a truncated file loaded and then
panicked on the first index. Mismatches are now MemoryError::Schema, stored
norms are used only when they match the record count, and embedding_dim == 0
with records present is rejected instead of panicking in chunks(0).

Co-Authored-By: Claude Fable 5.1 <[email protected]>
2026-09-19 05:37:21 -07:00
ClawHDF5 Coding Agent 45a38ba260 perf(agent): maintain a persistent flat embedding buffer for BLAS/Accelerate search
blas_cosine_batch and accelerate_cosine_batch_vecs re-flattened the
entire Vec<Vec<f32>> corpus into a fresh Vec<f32> on every single
query before running the batch matmul — an O(N·dim) copy paid per
query when fast-math/accelerate/openblas is enabled, even though a
flat fast-path (blas_cosine_batch_flat / accelerate_cosine_batch)
already existed for pre-flattened input.

Add MemoryCache::embeddings_flat, a contiguous [N × embedding_dim]
buffer maintained incrementally in push/update/compact (O(1) amortized
append, O(dim) in-place overwrite, O(n) rebuild only on compact/bulk
load). schema.rs's direct-push load path calls the new rebuild_flat()
explicitly. flat_embeddings() now just clones the already-maintained
buffer instead of rebuilding it.

Thread the flat buffer through strategy::search_with_metrics as a new
vectors_flat parameter, used only by the Blas/Accelerate arms (now
calling the *_flat variants); other strategies are unaffected. No
current caller wires search_with_metrics into the production query
path yet (only its own tests exercise it) — this fixes the identified
per-query re-flatten and makes the flat buffer available for whenever
that wiring lands.

INT-16
2026-08-17 00:41:23 +00:00
ClawHDF5 Coding Agent 4051d5c16e perf(agent): cache lowercased entity names and early-exit in resolve_or_create
resolve_or_create allocated a fresh lowercased String for every entity
on every call (this runs per extracted mention during entity/relation
extraction) and never short-circuited on an exact dist == 0 match,
scoring every remaining entity regardless. Add Entity::name_lower,
computed once at construction (add_entity, and schema.rs's direct-push
load path), and break out of the scan as soon as an exact match is
found.

INT-12
2026-08-17 00:32:20 +00:00
Omar SobhandClaude Sonnet 4.6 2f9f73bf24 perf: switch embedding compression to Zstd-3 + remove redundant shuffle call
- Use Zstd level 3 instead of deflate(1) for embedding dataset compression.
  Auto-shuffle (already the default since the TDT pre-filter commit) is now
  the only shuffle needed — the explicit .with_shuffle() call was redundant.
- Benchmark: save_without_wal_single improves 67 → 61 µs (-9%).

Co-Authored-By: Claude Sonnet 4.6 <[email protected]>
2026-07-01 01:37:58 +00:00
osobhandClaude Opus 4.8 4fa7e89a46 feat: compress fixed-length string datasets (+ fix shared chunk-cache bug)
clawhdf5-agent: fixed-length string datasets (memory text chunks, session
summaries, ids, tags, entity/relation names) were stored uncompressed behind
a stale "chunked compound not yet supported" comment. Chunked writes work for
fixed-size string/compound datatypes like any other, so write_string_dataset
now chunks + deflates once a dataset's payload reaches 4 KiB — large,
redundant NullPad content compresses well while tiny metadata stays
contiguous (no chunk-overhead bloat). The dead `compress` parameter is
removed in favor of this size heuristic.

clawhdf5-format: enabling string compression exposed a latent bug — the
per-file ChunkCache built its chunk index once and reused it for every
chunked dataset in the file, keyed only by chunk coordinate with no dataset
discrimination. With one chunked dataset per file this never surfaced; with
two of different rank (a 1-D compressed string array and the 2-D embeddings
matrix) the first dataset's rank-1 index was reused for the second, panicking
with an out-of-bounds chunk coordinate. The cache now binds to a dataset by
its chunk-index address and rebinds — dropping the index, chunk-index map,
layout, and decompressed slots — whenever the dataset being read changes,
while still caching repeated/sequential access to the same dataset.

Tests: facade regression reading a 1-D compressed string dataset and a 2-D
compressed f32 dataset through one shared File cache (verified to panic
without the fix); existing agent e2e tests (large text chunks, migration
round-trip) now pass with compression on.

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-06-03 22:48:39 +00:00
redclawsystems 3f222f6956 Merge pull request 'docs(clawhdf5): document DType variants, fix unresolved doc links' (#17) from sdlc-docs/clawhdf5-types-20260514-165210 into main 2026-05-14 23:54:48 +00:00