fix(format): apply the base address of files with a user block
A file may start with a user block (h5py userblock_size, h5jam), putting the superblock at 512, 1024, ...; every address in the file is then relative to the superblock. The signature search found it, but every reader passed the whole file to the parsers, so addresses landed userblock bytes early and the root group failed with InvalidObjectHeaderVersion (twithub.h5, twithub513.h5, h5clear_fsm_persist_user_*.h5). Readers now view the file from the superblock on, taking the signature's position as the base address as libhdf5 does: File (mmap, buffered, from_bytes), MmapFile, LazyFile, AsyncHDF5File, the VOL and MPI VOL readers, the HNSW loader and external VDS source files. File, MmapFile and LazyFile gain user_block_size(). The new signature::split_user_block returns the two parts, and Superblock::parse refuses a non-zero offset (UserBlockNotStripped) so a format-level caller cannot silently apply superblock-relative addresses to the whole file. Co-Authored-By: Claude Opus 5.5 (1M context) <[email protected]>
This commit is contained in:
@@ -73,6 +73,9 @@ the VDS item, which is marked.
|
||||
- `%b` printf-style source names are not expanded.
|
||||
- Hyperslab selection versions 1 and 2 are refused.
|
||||
- **Files with a user block:** the base address is not applied.
|
||||
**Fixed 2026-09-25:** every reader views the file from the superblock on
|
||||
(`twithub.h5`, `twithub513.h5`, `h5clear_fsm_persist_user_*.h5`; the
|
||||
`twithub` files still stop at the user-defined link type below).
|
||||
- **Old-style shared messages (version 1)** read the wrong address.
|
||||
**Fixed 2026-09-25:** the address follows a length-sized heap offset
|
||||
(`tcompound.h5`, `tcompound2.h5`; their datasets now stop at the layout
|
||||
|
||||
Reference in New Issue
Block a user