test: let the interop suites find a Python that actually has h5py
Every Python interop suite had stopped running on this machine: the h5py writer round-trips, the facade suite, netCDF4 and the reference files. `python3` is 3.14, nothing on the box has h5py, and PEP 668 refuses to install it into a system interpreter at all — so the availability probes all returned false and each suite skipped without failing. A silent skip here is exactly how the v5 compound-datatype bug reached a release, so the probes now read `CLAWHDF5_PYTHON` and `ci-test.sh` picks up `.venv/bin/python` on its own. The detection sits at the top of the script rather than beside the interop step, because the non-ignored suites run in the earlier `cargo test` step and would otherwise still miss it. `CLAWHDF5_REQUIRE_INTEROP=1` continues to turn a skip into a failure. Verified against a venv with h5py 3.16 / HDF5 2.0.0: 94 interop tests across the four suites, all passing. Co-Authored-By: Claude Opus 5 (1M context) <[email protected]>
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@@ -9,6 +9,15 @@ use clawhdf5_netcdf4::{AttrValue, NetCDF4File};
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// ---------------------------------------------------------------------------
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// Helpers
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// ---------------------------------------------------------------------------
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/// The Python interpreter to drive interop checks with.
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///
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/// `CLAWHDF5_PYTHON` lets these run against a virtualenv holding h5py, which
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/// on a PEP 668 "externally managed" system is the only place it can be
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/// installed. Without it the suite silently skips, and a silent skip here is
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/// how a datatype bug once reached a release.
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fn python() -> String {
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std::env::var("CLAWHDF5_PYTHON").unwrap_or_else(|_| "python3".to_string())
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}
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/// When `CLAWHDF5_REQUIRE_INTEROP=1` (set in CI), a missing Python dependency
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/// is a test failure instead of a silent skip.
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@@ -17,7 +26,7 @@ fn interop_required() -> bool {
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}
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fn netcdf4_python_available() -> bool {
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Command::new("python3")
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Command::new(python())
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.args(["-c", "import netCDF4; print(netCDF4.__version__)"])
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.output()
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.map(|o| o.status.success())
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@@ -25,7 +34,7 @@ fn netcdf4_python_available() -> bool {
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}
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fn xarray_available() -> bool {
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Command::new("python3")
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Command::new(python())
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.args(["-c", "import xarray; print(xarray.__version__)"])
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.output()
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.map(|o| o.status.success())
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@@ -59,7 +68,7 @@ macro_rules! skip_if_no_xarray {
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}
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fn run_python(script: &str) {
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let output = Command::new("python3")
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let output = Command::new(python())
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.args(["-c", script])
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.output()
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.expect("failed to run python3");
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