feat(conformance): in-repo, reproducible conformance sweep
conformance/run.sh fetches eight public HDF5 corpora pinned by commit (conformance/corpus.txt) into a gitignored cache, reads every file with clawhdf5 (conformance/probe, a crate outside the workspace) and with h5py/libhdf5 (ref.py), and the CVE files with h5dump, each under a timeout and an address-space limit; compare.py classifies the files, report.py writes CONFORMANCE.md and check.py gates on panics/hangs/crashes/OOM and on regressions against conformance/baseline.json. ~25 s once cached. Changes from the ad-hoc audit harness: - the probe compares non-IEEE-layout floats (N-Bit) and integers with a bit offset or reduced precision as the values libhdf5 converts them to, not raw file bytes: 8 files that showed as mismatches now read identically; - ref.py exits without tearing down h5py objects: libhdf5 2.0 aborts while freeing them for two files about half the time, which flipped them between ok and h5py-cannot-read from run to run; - the file list is defined (list_files.py): netCDF classic files are left out, 11 HDF5 files the ad-hoc sweep missed are in. Co-Authored-By: Claude Opus 5.5 (1M context) <[email protected]>
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#!/usr/bin/env bash
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# fetch-corpus.sh [cache_dir]
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#
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# Download the corpora pinned in conformance/corpus.txt into the (gitignored)
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# cache: <cache>/src/<name> is a shallow, sparse, blob-filtered checkout of the
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# pinned commit and <cache>/corpus/<name> links to the swept root inside it.
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# A corpus already checked out at its pinned commit is left alone, so a second
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# run costs nothing and needs no network.
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set -euo pipefail
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HERE="$(cd "$(dirname "$0")" && pwd)"
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CACHE="${1:-${CONFORMANCE_CACHE:-$HERE/.cache}}"
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mkdir -p "$CACHE/src" "$CACHE/corpus"
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CACHE="$(cd "$CACHE" && pwd)"
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retry() { local i; for i in 1 2 3 4; do "$@" && return 0; sleep $((i * 5)); done; return 1; }
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grep -v '^[[:space:]]*\(#\|$\)' "$HERE/corpus.txt" | while read -r name url commit root patterns; do
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src="$CACHE/src/$name"
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if [ -d "$src/.git" ] && [ "$(git -C "$src" rev-parse HEAD 2>/dev/null)" = "$commit" ]; then
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echo "cached $name @ ${commit:0:12}"
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else
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echo "fetching $name @ ${commit:0:12} from $url"
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rm -rf "$src"
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git init -q "$src"
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git -C "$src" remote add origin "$url"
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git -C "$src" config advice.detachedHead false
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if [ -n "$patterns" ]; then
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git -C "$src" config core.sparseCheckout true
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# no-cone patterns (globs); `set -f` keeps the shell from expanding them
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(set -f; printf '%s\n' $patterns) > "$src/.git/info/sparse-checkout"
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fi
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retry git -C "$src" fetch -q --depth 1 --filter=blob:none origin "$commit"
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retry git -C "$src" checkout -q FETCH_HEAD
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got="$(git -C "$src" rev-parse HEAD)"
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[ "$got" = "$commit" ] || { echo "error: $name checked out $got, expected $commit" >&2; exit 1; }
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fi
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ln -sfn "$src/$root" "$CACHE/corpus/$name"
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done
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echo "corpus ready in $CACHE/corpus"
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