Commit Graph
303 Commits
Author SHA1 Message Date
Omar Sobh ad1cee0b08 refine polish: before/after diff view + accept/cancel/restore
Refine no longer clobbers the mission description on click. Flow:
  1. Click Refine → server generates the rewrite, returns
     { original, refined } WITHOUT persisting
  2. RefineDiffModal shows a side-by-side pane (raw before,
     Markdown-rendered after)
  3. User picks:
     - Accept → PATCH /api/missions/{id}/description commits refined
     - Cancel → discards the proposal, description unchanged
     - Restore original → forces a write of `original` (undo path
       for accidentally-accepted refines, since Accept+Cancel is
       still a two-step confirmation)

Backend:
  - mission_refiner::refine returns a RefineResult { original, refined }
    struct instead of persisting + returning the text
  - routes::missions::refine now returns { original, refined }
  - routes::missions::set_description added on PATCH
    /api/missions/{id}/description (draft-only)

Frontend:
  - lib/api/missions — refineMission return type is now RefineResult;
    added setMissionDescription
  - MissionCanvas — RefineDiffModal + DiffPane subcomponents;
    accept / cancel / restore handlers wired to state

Closes task #20.
2026-07-19 18:46:14 -07:00
Omar Sobh 278cbf90b7 artifacts tab: inline PDF preview via iframe (task #19) 2026-07-19 18:43:46 -07:00
Omar Sobh 267b28a762 mission canvas: security-scan + benchmark trigger buttons
Fills the frontend gap after slices 7 + 8 shipped the backend runners
without triggers. Each phase card in the Phases tab now grows an
action row when the mission is running or completed:
  - security_scan phase → "Run scan" button (POSTs /security-scan)
  - benchmark phase → "Baseline" + "After" buttons, iteration auto-
    derived from the current benchmark_snapshots count

Findings from security_scan already surface in the Tasks tab via
the task-card parser (external_id = cargo_audit:RUSTSEC-... etc);
the tool prefix in the badge is enough to distinguish sources
without a separate grouped view.

Closes tasks #17 + #18.
2026-07-19 18:42:40 -07:00
Omar Sobh a3d5a5a96d level-up UI: inbox + review drawer + per-claw/per-team triggers
Fills the frontend gap left after slice 8.5 shipped the level-up
backend without any UI. Reviewers can now:
  - See pending proposals across the workspace (LevelUpInbox)
  - Trigger a proposal from any claw's ClawCommandCenter header
  - Trigger a team-scoped proposal from TeamObserver's header
  - Review one proposal item-by-item and apply the approved subset
    (or reject all) via LevelUpDrawer

The drawer preselects auto-applicable kinds (identity_refinement,
skill_add, skill_candidate, brain_consolidation) and disables the
manual-only kinds (roster_change, mcp_bundle_change) with an
inline "manual — needs team wizard" hint, matching what the
backend applier does per commit 9b5e63c.

New files:
  - frontend/src/lib/api/level-up.ts — typed client for the 6 endpoints
  - frontend/src/components/dashboard/LevelUpDrawer.tsx — review pane
  - frontend/src/components/dashboard/LevelUpInbox.tsx — pending list

Wired:
  - ClawCommandCenter identity header — "Level up" pill (purple)
  - TeamObserver header — "Level up team" pill (purple)

The inbox is deliberately not yet mounted anywhere; it's a
composable component ready to drop into the missions or agent tier
(follow-up decision on which surface hosts the global list).
2026-07-19 18:41:19 -07:00
Omar Sobh 56201a6985 mission canvas: add Refine button + markdown-rendered description
Adds a Refine button to the left of Refresh + Launch on the mission
detail toolbar (draft-only). Clicking it POSTs to a new endpoint that
calls Gemini 2.5 Flash to rewrite the user's freeform description into
a coherent, sectioned Markdown brief (Objective / Context / Scope /
Constraints / Acceptance Criteria / Open Questions) ready for the
research + coding agents to ingest cleanly.

Backend:
  - crates/cm-api/src/mission_refiner.rs — Gemini call with a
    system prompt that preserves user-provided facts, avoids
    invention, and emits raw markdown (not JSON).
  - POST /api/missions/{id}/refine — draft-only, 400 on empty
    description or non-draft state.
  - cm-db::repo::missions::set_description helper.

Frontend:
  - MarkdownBlock — tiny zero-dep renderer for h1/h2/h3, bullet +
    numbered lists, **bold**, `code`, paragraphs. Deliberately
    small; the refiner emits a bounded subset.
  - MissionCanvas — Refine button (Sparkles icon, secondary style)
    to the left of Refresh; description now renders through
    MarkdownBlock instead of a single <p>. Disabled while
    description is empty or a refine is in flight.
  - lib/api/missions — refineMission client.
2026-07-19 17:20:34 -07:00
Omar SobhandClaude Opus 4.7 4663348a0e slice 9: big-bang cutover — delete legacy research + loops UI
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Missions has been the unified surface for a while (Slices 1-8.5).
This slice makes it the ONLY surface by deleting the legacy
research + loops UI:

Removed frontend files:
  - dashboard/ResearchList.tsx
  - dashboard/ResearchCanvas.tsx
  - dashboard/ResearchWizard.tsx
  - dashboard/LoopsList.tsx
  - dashboard/LoopsCanvas.tsx
  - dashboard/LoopsWizard.tsx
  - dashboard/LoopStaffingStep.tsx
  - dashboard/NoAgentsGate.tsx
  - dashboard/ResearchArtifactPicker.tsx
  - dashboard/AutoProvisionCard.tsx
  - dashboard/LiveRunLogs.tsx
  - lib/api/research.ts
  - lib/api/loops.ts

Dashboard.tsx cleanup:
  - Tier enum collapses to world | missions | claw | repos | infra
  - Dropped researchSel / researchRefresh / loopsSel / loopsRefresh
    state slots
  - Dropped the Research + Loops crumbs from the tab bar
  - Dropped the two rail icons; missions rail icon retitled
  - TIER_TABS lists missions in the second slot (was research)
  - Combined isInfra || isMissions || isRepos guard replaces the
    six-way branch

What INTENTIONALLY stayed (soft cutover on backend):
  - /api/research/* + /api/loops/* routes still respond — no UI
    hits them but external integrations (webhooks, prior curl
    scripts) don't hard-break on this deploy
  - research_topics / loops / research_outcomes / research_topic_agents
    / research_publish_approvals tables remain — the missions
    backfill from 0047 references these rows via config.legacy_*
    keys, and dropping the tables now would cascade FK deletes
    into topology_runs.research_topic_id / .loop_id nullouts
  - cm_db::repo::{research_topics, research_outcomes, loops} +
    cm_api::routes::{research, research_setup, research_pipeline,
    loops} + cm_runtime::loops kept — they're internal-only now,
    scheduled for a follow-up cleanup PR

Follow-up PR (dedicated cleanup):
  - Drop the 5 legacy tables + null out topology_runs FKs
  - Delete the ~4k LoC of backend routes/repos + their tests
  - Remove research/loops crumbs from URL history

Frontend TS check: clean (16 pre-existing unused warnings in
Dashboard.tsx are unrelated).

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-19 16:53:21 -07:00
Omar SobhandClaude Opus 4.7 58963d5083 slice 8: security scan runner + trigger endpoint
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Runs the security template's tool set (cargo-audit / gitleaks /
trivy fs / semgrep) inside the mission's team container and
materializes each finding as a mission_task keyed on the tool's
canonical id. The subsequent coding phase picks up the tasks and
applies remediations; the committer closes them by emitting
`COMPLETED: <external_id>` (Slice 5's task-card parser handles it).

Rust surface:
  - cm_api::security_scan::run(mission_id, phase_id)
  - Per-tool runners with JSON output parsing:
      cargo audit --json          → vulnerabilities[].advisory.id
      gitleaks detect --report-format=json → [{ Fingerprint, RuleID }]
      trivy fs --format=json      → Results[].Vulnerabilities[].VulnerabilityID
      semgrep --config=auto --json → results[] w/ rule+path+line fingerprint
  - Tool errors surface as a `warning` task instead of failing the
    scan — operator sees which need installing/fixing without a
    silent no-op.
  - Findings map to mission_tasks with external_id = "<tool>:<id>"
    (e.g. cargo_audit:RUSTSEC-2024-0001, gitleaks:<sha>,
    trivy_fs:CVE-2024-1234, semgrep:<rule>@<file>:<line>).

API:
  - POST /api/missions/{id}/security-scan { phase_id }
    → { findings, tasks[] } — full task list after upsert so the
    canvas can render immediately.

Frontend:
  - triggerSecurityScan helper in lib/api/missions.ts. Findings
    show up in the existing Tasks tab (Slice 5's UPSERT path).

Container requirements (opt-in):
  - Runs inside the team container via `docker exec`, so the tools
    must be present in that image. Missing = warning task, not fail.
  - `-w /workspace/repo` so scanners see the mounted repo. Reads
    teams.zeroclaw_container (populated on first phase run).

Follow-ups:
  - MCP bundle wrapping the same tools as agent-callable functions
    (currently agents scan by shelling out to `cargo audit` etc.
    directly; a typed MCP wrap lands with clean audit trail).
  - Auto-fire from the security_hardening workflow template on
    phase transition (currently manual via API trigger).
  - Bundle the four tools into the runtime image (or a dedicated
    security-tools image) so operators don't have to install them.

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-19 16:19:29 -07:00
Omar SobhandClaude Opus 4.7 f843c9ddb1 slice 7: before/after benchmark runner
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Executes a benchmark harness inside the mission's team container
and records the resulting metrics as a benchmark_snapshots row keyed
on (phase_id, iteration). Baseline pass (iteration=0) captures
before_metrics; each post-iteration call captures after_metrics +
computes delta vs baseline.

Rust surface:
  - cm_db::repo::missions::upsert_benchmark_snapshot / benchmark_snapshots_for
  - cm_api::benchmark_runner::{baseline, after_iteration, run}
  - Harness enum: Auto | Criterion | CargoBench | VitestBench |
    PytestBench | Shell (each with a command() vector)
  - Auto detection peeks at the repo layout inside the container
    (Cargo.toml → CargoBench, package.json → VitestBench, pyproject
    → PytestBench). Falls back to a Shell echo when nothing
    identifiable.
  - Bencher-format line parser extracts (name, ns_per_iter,
    plusminus) so criterion + `cargo bench` output become structured
    samples the canvas can diff.
  - compute_delta pairs samples by name, emits {before_ns, after_ns,
    delta_pct, direction: improved|regressed}.

API:
  - POST /api/missions/{id}/benchmark { phase_id, slot, iteration? }
    triggers baseline or after run and returns the mission's full
    snapshot list.
  - GET /api/missions/{id} now includes `benchmarks[]` in the detail
    payload.

Frontend:
  - New Benchmarks tab on MissionCanvas with iteration + driver
    header, plus a 4-column grid (bench / before / after / Δ%) when
    delta samples are present. Improved deltas render green,
    regressions red.
  - TS types + triggerBenchmark() helper in lib/api/missions.ts.

Wiring notes:
  - team_container_for_mission reads teams.zeroclaw_container — that's
    populated by topology_worker::try_team_gateway_url on first run,
    so trigger baseline AFTER the mission's first phase spawns the
    container.
  - Not auto-fired yet by phase execution; that's the "template phase
    executor" work that spans Slices 4-8. Manual API trigger works
    today; automated hook is a follow-up.

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-19 15:32:47 -07:00
Omar SobhandClaude Opus 4.7 9ba5c06a1a slice 3: 6 team templates seeded from TOML recipes
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Team templates are the canonical rosters + tool bundles that mint
concrete teams for a mission. Every builtin ships as a TOML recipe
under templates/teams/*.toml, loaded into the DB at server boot.

Migration 0048 adds:
  - team_templates    (id, key, name, stack, default_topology,
                       risk_profile, mcp_bundles, version, source,
                       workspace_id)
  - template_roles    (m2m: template_id + slot; system_prompt,
                       skills[], brain_seed)
  - teams gets template_id + template_version for level-up lineage

Ships 6 builtins:
  - rust_sdlc  — planner/coder/tester/reviewer/committer for Rust
  - backend    — api_designer/db_engineer/coder/tester/committer
                 (Postgres, DuckDB, graph DBs, wire protocols)
  - frontend   — designer/coder/tester/committer (React + Tailwind + ShadCN)
  - mobile     — designer/coder/tester/committer (Expo, RN, iOS, Android)
  - gpu        — arch_analyst/kernel_author/bench_engineer/coder/committer
                 (CUDA, Metal, ROCm from Rust)
  - threejs    — scene_designer/coder/shader_author/perf_engineer/
                 committer (three.js, WebGL, WebGPU)

Each role has a versioned system_prompt + skill list + brain_seed
markdown. Skills column is a name array today; Slice 3.5a promotes it
to a typed m2m join with the real skills catalog.

Server boot:
  - team_template_loader::load_builtins reads TOML from
    /etc/clawmates/templates/teams (container) or templates/teams (dev),
    upserts idempotently. Deterministic uuid per template key (sha256
    of a fixed namespace + key) so ids are stable across boots.
  - Dockerfile copies templates/ to /etc/clawmates/templates.

Read API:
  - GET /api/team-templates       — list all
  - GET /api/team-templates/{id}  — detail with roles

Wizard:
  - Step 3 rewired from a raw team_id text field to a template picker
    with "LLM auto-provision" as the default option + one card per
    builtin, showing stack, topology, risk profile, and description.
  - Mission create now passes team_template_id (not team_id) so phase
    execution knows which template to mint from.

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-19 12:41:15 -07:00
Omar SobhandClaude Opus 4.7 fc67936e33 slice 2: MissionWizard + MissionCanvas + MissionsList frontend
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Adds the unified missions tier to the dashboard. Runs in parallel
with Research + Loops tabs until Slice 9's big-bang cutover.

New files:
  - lib/api/missions.ts       — typed API client + 5 template presets
                                (research_only, research_and_code,
                                security_hardening, refactor, benchmark)
  - dashboard/MissionsList.tsx — sidebar list with status pills +
                                template-kind badges + new-mission CTA
  - dashboard/MissionWizard.tsx — 5-step adaptive wizard:
      1) template picker (5 cards)
      2) title/description + repo (when required)
      3) team (placeholder — Slice 3 wires templates + auto-provision)
      4) schedule (one-shot or cron)
      5) review + launch
  - dashboard/MissionCanvas.tsx — 4-tab detail view (overview/phases/
                                tasks/artifacts), draft→running launch

Dashboard.tsx gets a new "missions" tier + crumb + rail icon (flag).

Slice 2 ships a minimal implementation that creates missions with the
template's canned phase composition. Slice 4 replaces the preset table
with real TOML-recipe dispatch on the server; the client's fallback
presets keep offline preview working.

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-19 12:19:19 -07:00
Omar SobhandClaude Opus 4.7 82b5cf4385 research canvas: refresh claws + make Description collapsible
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Two UX cleanups on the research canvas:

1. Agent cards were showing "(missing agent)" for every slot after an
   in-wizard auto-provision because the Dashboard's `claws` prop is SSR-
   rendered and doesn't include agents created during the client session.
   Refetch /api/team/claws on canvas mount + refreshKey change, merge
   with the prop (fresh wins) so newly-provisioned agents resolve
   correctly without a page reload.

2. The Description block was always fully expanded. Wrap it in <details
   open> so the user can collapse it once they've read it, matching the
   existing "Original prompt" pattern.

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-18 18:21:37 -07:00
Omar Sobh efc13f2904 trim: drop stale roster-empty comment (LoopsWizard)
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2026-07-18 16:26:15 -07:00
Omar Sobh c9dc96c44b fix: use TopologyKind alias to keep LoopsWizard under 1250 lines
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2026-07-18 16:26:02 -07:00
Omar SobhandClaude Opus 4.7 c3e8f3ee01 fix: match AutoProvisionedAgent shape + valid OutcomeKind for loops
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Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-18 16:24:40 -07:00
Omar SobhandClaude Opus 4.7 279d785f5b loops wizard: extract AutoProvisionCard to stay under 1250 lines
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Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-18 16:23:13 -07:00
Omar SobhandClaude Opus 4.7 6f1515b1b0 team runs modal: expose runtime posture (risk_profile + mcp_bundles)
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PATCH /api/teams/{id}/runtime-config existed since the team-wizard work
but had no UI — you needed curl to swap a team's risk_profile or add
gitea_forge to its bundles. Add compact pickers to TeamRunsModal above
"Run now": a Risk profile <select> and a Bundle checkbox list.

Fetches current settings from GET /api/teams/{id} on open and PATCHes
inline on every change. No save button — the debounce is the user's
next click. Optimistic state; next-open resync corrects any drift.

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-18 16:19:12 -07:00
Omar SobhandClaude Opus 4.7 9cab32c354 loops wizard: auto-provision team in-wizard (parity with research)
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The LoopsWizard hard-blocked on an empty roster via NoAgentsGate — new
users had to bounce to the Agents page first. Match ResearchWizard's
flow: remove the top-level gate, add an auto-provision panel to the
staffing step (6) that derives 3-5 roles from the loop's task via
Claude Sonnet 5 and preselects the returned agents into
selectedAgents so the existing submit path publishes them onto the
loop with zero extra clicks.

Existing rosters still work — the hand-pick panel now sits below the
auto-provision card and only renders when the workspace has agents and
no team was auto-provisioned this session.

Co-Authored-By: Claude Opus 4.7 <[email protected]>
2026-07-18 16:17:57 -07:00
Omar Sobh e95e251c9c empty state: primary CTA button instead of hunt-for-plus text
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The '+ new topic' button (commit 47a4242 unlocked it when the
workspace roster was empty) is a tiny 34x34 corner icon that
disappears against the header on a truly empty page. Users kept
asking why they can't start a research topic when in fact they
could — the target was just invisible.

Replace the 'Hit the + button to launch the wizard' hint with a
proper primary CTA: coral pill 'Start a research topic' with the
Plus icon, centered in the empty sidebar. Same treatment for
LoopsList → 'Start a loop'.

The wizard flow's auto-provisioning behavior means the empty-
workspace path is now the happy path — one click and you get
everything (topic, team, agents, container). The empty state
should invite that click, not require a hunt.
2026-07-17 21:33:30 -07:00
Omar Sobh f8589471bc AgentComputer: clickable model picker (dropdown → PATCH /api/claws/:id/model)
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The '● <model>' text on the per-agent Computer slide-out was
read-only — swapping a claw's model required curl. Now it's a
button that opens a small dropdown of the curated fleet models:

- Sonnet 5 / Opus 4.8 / Haiku 4.5 / Sonnet 4.6 (Anthropic)
- GLM 4.6 / 5.2 (Z.AI)
- Kimi K2 (Moonshot)
- Gemini 2.0 Flash (Google)
- Llama 3.3 70B (Groq)

Click a model → PATCH /api/claws/{id}/model → picker closes, the
button relabels to the new selection. The endpoint persists the DB
binding + best-effort re-provisions the runtime; the swap applies
on the claw's next turn. Long-tail models still work via curl with
any string.

Adds an optional onModelChanged callback so callers (Dashboard's
runtime-config enrich cache) can refresh their state without a
full re-render.
2026-07-17 21:18:29 -07:00
Omar Sobh ac8c689f50 logs + team parity: pretty step/container renderers; quota + audit on team creation
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Two bundled changes:

── LiveRunLogs prettification ──────────────────────────────────
The Steps + Container tabs were plain mono lines with a single
color per event. Now they get structured layout:

Steps:
- Color-hashed actor pill (stable palette so [Distiller] and
  [Novelty Analyst] each get their own hue across the session).
- Phase pill (plan=cyan, work=green, synth=amber, aggregate=purple).
- Token count pill formatted 1.2k / 14.3k / etc.
- Gated-action warning pill in amber when > 0.
- Left-border color strip keyed to the actor for at-a-glance
  visual grouping.
- Long outputs collapse to their first 300 chars with a '+ N more'
  toggle to expand the full text.
- 'done' events get a green (or red for error) border strip +
  pill instead of blending into the stream.

Container:
- Splits '[actor] action (outcome) · msg' into colored spans —
  actor pill (deterministic color), action in dim, outcome pill
  green/red/dim by state.
- Non-line events (info/error/done) get their own left-border
  strip so bash echoes and stack traces don't drown in the daemon
  chatter.
- Timestamps switch to HH:MM:SS.mmm — dense but scannable.

Small palette (LOG constants) keeps the color budget bounded — no
new UI vocabulary, just cleaner reads of what was already there.

── Team-wizard governance parity ───────────────────────────────
build_team_with_lifecycle now matches POST /api/claws' governance:
- enforce_new_agent quota check per member (previously bypassed
  workspace agent quotas entirely for team/auto-provision paths).
- audit::append('agent.created', ..., {source: 'team_wizard'}) per
  member so team-created claws appear in the same audit trail as
  individually-created ones. Adding a 'source' key distinguishes
  provenance without changing consumers.

.brain (h5) handling was already consistent between the two paths —
both use the lazy on-first-access load_brain hook seeded from
agents.system_prompt. No change there.
2026-07-17 18:20:56 -07:00
Omar Sobh 956be2cf4f wizard: in-place auto-provision team from topic (LLM-derived, sonnet-5)
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Step 5 of ResearchWizard was 'assign agents from workspace roster'.
When the roster was empty, the wizard body was hard-swapped for
NoAgentsGate — you couldn't reach step 5 at all.

Now step 5 shows a 'Team' panel:
- Big cyan card: 'Auto-provision team from this topic'. One click
  runs an LLM plan pass, gets 3-5 role slots + system prompts back,
  materializes claws via the existing build_team pipeline, stamps
  runtime posture, returns a shape that drops straight into the
  submit body's agents[]. Card flips green with the derived roster.
- Below that: the classic roster picker, but only when the workspace
  actually has ≥1 claw AND auto-provision hasn't landed. Otherwise
  hidden — no dead empty-state affordance.

Every gate that required agents.length > 0 to render the wizard body
or the footer is gone. canNext gains a step-5 clause: allow Next when
EITHER auto-team is ready OR the user handpicked from a non-empty
roster.

Backend
- POST /api/teams/auto-provision — accepts {title, description,
  outcome_kind, topology_kind?, model?, risk_profile?, mcp_bundles?}.
  Derives topology from outcome_kind (integrations → pipeline; else
  hub_spoke). LLM plan pass yields a JSON roster of 3-5 roles
  (role_slot, name, system_prompt). Materializes team + claws via
  build_team, stamps risk_profile (default research_web_readonly) +
  mcp_bundles (default [clawmates_door, gitea_forge]). Response
  carries team_id + agents[] in the shape /api/research already
  expects.
- Every provisioned claw runs on claude-sonnet-5 by default;
  overridable via the model field.

Follow-ups (not in this slice):
- Same picker in LoopsWizard (slice C — parallel change, same API).
- Post-create 'Team' section on ResearchCanvas / LoopsCanvas so
  users can rebind after the fact (slice D).
- Full Teams tier UI + Agents-page deprecation (slice E).
2026-07-17 16:08:07 -07:00
Omar Sobh 47a42423e3 wizards: unlock '+' buttons when roster is empty
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The 'no agents → button disabled' guard hard-locked the wizard
behind an already-populated roster, forcing users to detour to the
Agents page and come back. NoAgentsGate already handles the empty
state gracefully inside the wizard body; the button just needed to
open it. Applied to both ResearchList and LoopsList.

Follow-up (design in progress): let the wizard auto-provision a
team from the topic/loop itself so users never have to leave to
create agents.
2026-07-17 13:27:08 -07:00
Omar Sobh eb06e91ac3 dashboard(Agents): drop counts caption, align toolbar with title
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Previously the Agents header wrapped a 'N ORGS · N CO · N TEAMS ·
N AGENTS' small-caps caption above the title, with the toolbar
(select/history/brain) hanging off the right. Dense, noisy, and the
World tier already surfaces those counts at higher fidelity.

Now: single-line header — 'Agents' title on the left, toolbar flush
right, both center-aligned. Comment left in place noting where the
caption used to live in case we ever want it back.
2026-07-17 12:51:53 -07:00
Omar Sobh 0b7f247b0e wizard: 'fresh coding team' picker for paired coding loop
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Second slice of the per-loop-team arc. The paired-coding-loop checkbox
in ResearchWizard step 6 now exposes a two-option picker:

  ⦿ Provision a dedicated coding team (default when the loop is on)
     — fresh 'Coding · <topic>' team row, risk_profile =
       coding_readwrite, clawmates_door in mcp_bundles. Loop's
       team_id is bound at wizard-submit time.
  ○ Reuse the research team (legacy) — no team_id bound; coding
     iterations spawn against the research topic's container.

Frontend
- New codingTeamMode state, radio picker rendered under the checkbox.
- research.ts createTopic body gains paired_coding_team_mode?: 'fresh'|
  'reuse'.

Backend
- CreateTopicRequest gains paired_coding_team_mode: Option<String>.
- materialize_topic_loops takes it through and, when 'fresh', calls
  the new provision_fresh_coding_team helper — inserts a teams row
  via the existing insert_team_with_lifecycle (pipeline kind, same
  graph as the loop), sets its runtime-config via
  set_team_runtime_config, then binds loop.team_id.
- All operations best-effort with stderr logging — a team-provision
  failure leaves the loop functional under the legacy fallback.

Not shipped in this slice (deferred to runtime hookup slice):
- research_container::spawn keyed on team_id → per-team container
- Config template rewrite injecting the team's risk_profile
- Migration of existing paired loops onto their own teams

The plumbing lands now so the wizard's intent is recorded; the
runtime honors it in the next PR.
2026-07-16 20:49:54 -07:00
Omar Sobh b2a38da3f9 loops: 'View full output' modal for a completed iteration
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The expanded iteration panel now exposes the full topology_run.result
in a proper viewer instead of leaving it stranded in Postgres. Reads
/api/topology-runs/:id (existing endpoint, no backend change), prefers
result.final_output (the produced markdown/code), falls back to a
per-step transcript, last-resort a raw JSON dump.

Modal renders as a fixed overlay — Escape or backdrop-click to close.
Header carries kind/status/steps/tokens metadata, Copy button hits
navigator.clipboard, Download button emits a .md file named
run-<id-slice>.md. The button on the row is disabled until the
iteration terminates (completed | failed) — running iterations
already have LiveRunLogs surfacing the tail.
2026-07-16 18:05:57 -07:00
Omar Sobh 2ba40b03b7 loops: per-iteration live logs (Steps + Container tabs), collapse graph JSON
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The Loops canvas' IterationsTimeline was a flat status-pill list —
no way to see WHAT an iteration was actually doing. Meanwhile the
Research canvas had full LiveRunLogs with Steps + Container tabs
against the same underlying topology_run SSE endpoints. This
factors LiveRunLogs so both canvases share it.

Frontend
- LiveRunLogs gains a directRunId?: string prop. In this mode it
  skips the topic-scoped active-runs + pipeline-state polls and
  pins activeRun to the given id. topicId stays optional (topic
  mode unchanged from ResearchCanvas' perspective).
- LoopsCanvas IterationsTimeline: each row is now a click-to-
  expand card. On expand, renders <LiveRunLogs directRunId={...}/>
  right below the header — Steps + Container tabs, full SSE tail,
  same 320px terminal.
- Auto-opens the newest running/queued iteration so a click on
  'Run now' immediately exposes the live pane.
- New CollapsibleSection helper wraps the graph JSON block so it
  starts closed. Reference material stays one click away without
  cluttering the canvas.

Backend
- run_container_log_sse now resolves the tail target via
  loop.source_research_topic_id when the run itself has no
  research_topic_id. Paired coding loops (kind=exec with a
  source_research_topic_id) reuse the paired topic's team
  container, so we tail its docker logs. Pure loop runs still
  error with a clearer message.
2026-07-16 17:30:07 -07:00
Omar Sobh ae113dd319 live-run-logs: add Container tab that tails filtered daemon logs
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Steps summaries only fire AFTER each topology step completes — so a
stalled first turn was completely dark. Add a second tab that
streams the team runtime container's daemon log live via a new SSE
endpoint.

Backend
- GET /api/topology-runs/:id/container-log — workspace-scoped SSE
  around bollard's docker.logs(follow=true, tail=200). Buffers on
  newline so partial mux chunks don't truncate a log line.
- compact_container_log: parse a zeroclaw daemon line
  ('[actor] ... zc_action=X zc_outcome=Y ... msg') into
  '[actor] action (outcome) · msg'. Framing-only continuations are
  dropped; non-zc lines (bash echoes, backtraces) pass through as-is
  so nothing interesting is lost. ANSI escapes stripped.
- Everything funnels through one async_stream! so early exits
  (workspace check / docker connect / no bound topic) yield an
  'error' event and return without breaking Sse::new's single stream
  type.

Frontend
- LiveRunLogs gets a sub-tabs strip: Steps · Container.
- New useContainerLog(runId, active) hook — gated by tab so we don't
  hold two open SSE streams when the operator isn't looking.
- Same terminal widget renders each container line with a level
  color (info/done grey, line default, error red). Sub-tab pill
  shows count + status live.
2026-07-15 18:42:03 -07:00
Omar Sobh f70f6c679e research: errored-state card + one-click rerun (no wizard re-entry)
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When a topic ends up parked in 'processing' with all runs failed and
nothing in flight, the sidebar card was still spinning as if
progress were happening. Now:

Backend
- topology_runs::run_counts_by_research_topic — batch query that
  returns (in_flight, failed-since-last-success) per topic. Used by
  the list endpoint; dynamic sqlx::query() so no prepare needed.
- TopicListItem DTO gains runs_in_flight + runs_failed.
- start_topic status guard relaxed: allow (standby) OR (processing
  AND runs_in_flight == 0). Blocks accidental double-fires on a
  live pipeline; permits rerun on a failed one. Same request body,
  same behavior once accepted, so the frontend just POSTs
  /research/:id/start on the RotateCw click.

Frontend
- ResearchList detects errored: status===processing && !in_flight
  && failed>0. Swaps the MiniSpinner for a red AlertTriangle and
  changes the status text to 'error · N failed'.
- New RotateCw icon button next to the delete Trash — same button
  cluster, one click, no wizard re-entry required. Disables while
  a request is in flight; error surfaces in the sidebar's shared
  error banner.
2026-07-15 16:27:43 -07:00
Omar Sobh 43f7880327 agent cards: disk-LED glow on live topology step
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Wire SSE step events from LiveRunLogs up to ResearchCanvas via an
optional onStep callback (StepPulse: {role, phase, node_id, ts}).
ResearchCanvas keeps a role -> {phase, expiresAt} map; a 250ms tick
clears expired entries so the glow fades naturally.

Each agent card:
- 8px LED dot next to the name (green idle-off / colored when live)
- outer glow via two-layer box-shadow when the agent's role_slot
  matches the last step's role, within a 2.5s window
- inline 'reading' / 'writing' hint below the role

Color mapping (disk-LED metaphor):
- Plan phase   -> cyan  #5ec8d8 (reading / decomposing)
- Work/Synth/Aggregate -> green #5fd08a (writing / producing)

Overlapping steps reset the timer so back-to-back activity on the
same role holds the glow. When no run is active nothing pulses —
LiveRunLogs is silent, no callback fires.
2026-07-15 14:42:57 -07:00
Omar Sobh 45292bf5fb sidebar polish: tighter chevron + '+' drops to Research line
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- Dashboard chevron: 24x24 → 22x22, top:10 right:8 → top:4 right:4
  so it sits in the true corner of the panel.
- ResearchList header: alignItems flex-start → flex-end so the '+'
  button lands on the 'Research' title baseline instead of hugging
  the 'N TOPICS' caption line. Reserved 34px right padding on the
  header so the '+' clears the corner chevron.
2026-07-15 12:59:07 -07:00
Omar Sobh 1876641415 dashboard: collapsible context sidebar (research/loops/repos/infra)
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The earlier PR added a chevron to RosterColumn but the research /
loops / repos / infra tiers render a completely different sidebar
(ResearchList/LoopsList/…) inside a fixed 252px div in Dashboard.tsx
— the RosterColumn toggle never appeared on those pages.

Add a proper collapse on the Dashboard's own context-list wrapper:
- Overlaid PanelLeftClose chevron top-right (top: 10, right: 8) so
  it doesn't fight the per-tier header content.
- When collapsed, wrapper shrinks to 32px with a PanelLeftOpen
  button; canvas gets the reclaimed ~220px.
- State via useSyncExternalStore on localStorage
  ('cm.dashboard.sidebarCollapsed'), same pattern I used on
  RosterColumn to satisfy react-hooks/set-state-in-effect.
2026-07-15 12:06:35 -07:00
Omar Sobh 573956e840 live-run-logs: fix step-record parser + surface pre-first-step phases
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Two fixes based on live smoke test:

- StepRecord parser: the SSE step payload is {node_id, role, phase,
  output, gated, tokens} (orchestrator::StepRecord), not the made-up
  shape my first pass looked for. Render as '[role] phase · <first
  line of output> · Nt · N gated'.

- Pre-first-step visibility: the checkpoint only journals AFTER each
  turn completes, so the container-startup + agent-boot window (often
  30-90s for the first step) was completely dark ('waiting for first
  step…'). Poll pipeline-state every 2s and render its stages as
  pseudo-log lines (setup 🟢 staffing · 3 agents assigned / setup 🔵
  container · starting…) until real step events arrive.
2026-07-15 10:37:33 -07:00
Omar Sobh 2ef50bb30b lint(research): satisfy react-hooks/set-state-in-effect
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- RosterColumn: useSyncExternalStore on localStorage instead of
  hydrate-in-effect setState. Same-tab writes nudge subscribers via
  a synthetic storage event.
- LiveRunLogs: reset-on-runId-change via the React-sanctioned
  set-state-during-render pattern (prevRunId ref state), so the
  effect body no longer calls setState synchronously.
2026-07-15 10:20:29 -07:00
osobh 1d69866bcf research canvas: collapsible sidebar + live topology-run logs (#6)
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2026-07-15 17:01:48 +00:00
osobh 149ad992bb wizard: materialize picked repo across clawstor fleet at step-2-next (#5)
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osobh 1cb643142c research/publish: gate approve+reject on Owner role (#4)
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2026-07-15 04:28:01 +00:00
Omar Sobh ee05037095 research-pipeline-diag: state-aware statuses (waiting != failing)
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The diagnostic was calling any 0-outcome + 0-completed-runs state a
FAIL — red dot + 'No outcome produced yet — check the runs stage for
the failure reason'. That fires the moment a wizard-materialized
topic lands, before its very first turn even completes, and stays
red for the whole 2-3 min a legitimate coordinator turn runs. Result:
users see 'FAIL' on every fresh topic and can't tell a real failure
from a normal in-flight state.

Backend fix — introduce a `waiting` status (blue/pulsing in UI):

Runs stage:
  0 runs                   -> skip     ('No runs yet — pipeline hasn't fired')
  any running/queued       -> waiting  ('N in flight, M completed')
  all failed               -> fail     (with error text)
  some failed              -> warn
  all completed no fails   -> ok

Outcomes stage:
  outcome_count > 0        -> ok
  0 outcomes + 0 runs      -> skip     ('No outcome yet (pipeline hasn't fired)')
  0 outcomes + any running -> waiting  ('Waiting for the current run to finish…')
  0 outcomes + any failed  -> fail     (the actual silent-bug case)
  0 outcomes + all done ok -> warn     (weird — completed but wrote nothing)

Also suppresses the run stage's `latest_error` detail when the run
status is `waiting` or `skip` — reporting a stale error next to an
actively-running job is what made users think the current run had
failed.

Frontend:
- PipelineStage['status'] union grows a 'waiting' arm.
- Pill color: cyan (#5ec8d8) with a pulsing scale/opacity animation
  (new cm-pulse keyframe in motion.css).
- Strip summary line: 'Pipeline in flight — waiting for run to finish…'
  when there's any waiting stage and no failures.
- Border tint: cyan border when waiting, coral when failing, neutral
  otherwise.

Zero backend semantic changes to the outcome-write path — this is
purely UI truth-telling.
2026-07-11 08:38:15 -07:00
Omar Sobh bfcdca0583 research-canvas: managed-by-loop UI + start_topic guard (fold cleanup)
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Closes the UX gap the fold introduced: the topic canvas was still
showing "Start research" for standby-state topics even when a
scheduled loop already owned the runs. Clicking it would 409 (or
worse: race the loop into a duplicate run). Topic status stayed at
standby forever because the loop path bypassed start_topic's
set_status transition.

Four changes:

1. **Backend status transition** — compose_and_enqueue_iteration for
   kind='research' now calls set_status_if(standby, processing) on
   the topic before the run is enqueued. New DB helper set_status_if
   only advances when the current status matches the "from" arg —
   safe against races and re-invocations. Later iterations no-op
   since the topic is already past standby.

2. **has_managed_loop on TopicDetail** — get_topic hydrates a new
   ManagedLoop struct (loop_id, title, enabled, next_fire_at,
   last_run_id, schedule_summary) when a kind='research' loop is
   bound to the topic. summarize_schedule() derives a human string
   from the loop's triggers jsonb (e.g. "cron: 0 3 * * * · on new
   artifact", "one-shot", "manual"). New DB helper
   loops::research_loop_for_topic returns the row.

3. **Canvas branch** — nextAction takes a managedByLoop flag; when
   set + status=standby, returns null (no button). The canvas
   renders a "MANAGED BY LOOP" strip below the topic title showing
   loop name, schedule summary, next fire time, and enabled dot.
   Reviewer buttons (Request publish / Approve / Reject) still show
   normally in later states — reviewers should still promote outcomes
   even when a loop is producing them.

4. **start_topic guard** — refuses with 409 when a research loop
   already owns the topic. Closes the direct-POST hole for anyone
   bypassing the frontend.

TS type + summarize_schedule live in the same commit so an old
client hitting a new backend just ignores the extra field (no
breakage), and a new client hitting an old backend renders the
classic buttons (managed_by_loop is optional).
2026-07-10 17:52:13 -07:00
Omar Sobh 3e42b1ea39 research-wizard: schedule step (once/nightly/manual) + paired coding loop
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Completes the research/loop fold. The wizard now closes with a
"How should this research run?" step; picking any mode materializes a
kind='research' loop bound to the topic, and an optional checkbox
adds a paired kind='exec' loop that consumes each new artifact.

Frontend:
- ResearchWizard grows from 5 to 6 steps. Step 6 is the schedule
  picker:
    · Just once — initial_burst=1, no other triggers
    · Nightly   — initial_burst=1 + cron "0 3 * * *"
    · Manual    — webhook_enabled=true
  Below the radios, an optional card offers "Also create a coding
  loop that consumes each new artifact" — creates a paired
  kind='exec' loop with on_artifact_update=true + initial_burst=1
  bound to the same topic.
- createTopic API type extended with `schedule` + `create_paired_coding_loop`.
- Both fields ride the existing POST /api/research call; back-compat
  is preserved when the wizard omits them.

Backend:
- CreateTopicRequest gains TopicSchedule + create_paired_coding_loop.
- After topic + agent attach, create_topic calls
  materialize_topic_loops which:
    1. Creates a research-kind loop titled "Research · <topic>" bound
       to the topic. Triggers vary by schedule mode; next_fire_at
       computed from cron for nightly. Falls back silently if
       loop-create errors so the topic still lands.
    2. Flips kind to 'research' via loops::set_kind (NewLoop doesn't
       take kind directly — default is 'exec' for backward compat).
    3. Optionally creates a coding loop titled "Coding · <topic>"
       with on_artifact_update=true + initial_burst=1.
- cm_db::repo::loops::set_kind — trivial UPDATE helper used by the
  materialize path.

D-answer callouts:
- D1 (fold): every runnable thing is now a loop. "Just once" is a
  research loop with initial_burst=1 and no other triggers.
- D2 (inherit): both paired loops carry the same source_research_topic_id
  — repo binding lives on the topic, not duplicated.
- D3 (coordinator resolves): the research iteration prompt (from the
  earlier commit) instructs the team to preserve stable INT ids and
  mark deprecations; coding loops' consumed lists stay valid across
  versions.

Follow-ups queued:
- Kind pill on LoopsList cards (research=purple, exec=cyan) so users
  can tell them apart at a glance.
- Extract start_topic's task-build so kind='research' iterations
  reuse the same coordinator prompt shape as one-shot runs (they
  currently use a simpler refresh-oriented prompt; that's fine for
  MVP but a rich shared build would give better parity).
- Research topic sidebar shows "linked to N loops" badge.
2026-07-09 23:00:04 -07:00
Omar Sobh 5aa2de7f30 loops-wizard: initial_burst + on_artifact_update trigger UI
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Surfaces the two new trigger fields shipped in the previous commit so
users can compose the new loop patterns without editing raw jsonb.

Step 4 (Triggers) now has five toggles instead of three:
1. **Run at create-time (initial burst)** — number input, defaults to 1
   so every new loop runs at least once. Toggle off = classic behavior
   (no auto-fire).
2. Cron schedule (existing)
3. On previous completion (existing) — pairs with initial_burst > 1
   for a back-to-back burst chain, and with cron for continuous
   iteration between schedule ticks.
4. **On new research artifact** — visible always; auto-disabled with
   an explanatory label when no source topic is bound. Coalesced
   server-side against in-flight runs so rapid revisions don't spawn
   duplicates.
5. Webhook (existing)

Body wiring:
- Sends initial_burst > 0 → { initial_burst: N } in triggers jsonb.
- Sends on_artifact_update only when a source topic is bound (safety
  belt matching the backend's fan-out filter).

Step gate:
- Advancing from step 4 now requires ANY one of the five triggers
  (was just the three legacy toggles). The initial_burst default of 1
  means users can happy-path through this step without deliberate
  action, which is the intended nudge — every loop should have at
  least one path to run.

Read/write parity:
- readInitialTriggers grows two fields so edit-mode reflects existing
  loops' triggers correctly.

Next commit lands ResearchWizard's "When should this run?" step +
optional paired coding loop, and after that the kind='research'
dispatch path.
2026-07-09 22:51:43 -07:00
Omar Sobh ce111273bb loops: reorder history collapsed under the progress pill
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Completes the reorder rationale loop — the previous commit captured
REORDER: markers server-side but nothing surfaced them. Now the loops
sidebar renders a small "N reorders ▸" button under the progress pill
whenever the loop has any reorder events. Click expands to a
newest-first list of "iter <n> · <rationale>" lines so a reviewer can
see, at a glance, when the plan was adjusted and why.

Backend:
- LoopProgress DTO gains recent_reorders: Vec<Value> — newest-first,
  capped at 5 so the card stays compact. Full history remains on the
  loop row's reorder_events column.
- cm_db::repo::loops::recent_reorders — reads the jsonb array, returns
  the last N in newest-first order.
- list_progress populates it per loop.

Frontend:
- LoopReorderEvent + recent_reorders on LoopProgress type.
- LoopsList tracks openHistoryId per-loop (one open at a time).
- Card renders history button + expanded panel styled to match the
  progress pill above.

Notes:
- The event object schema is {run_id, iteration, text, ts}. Fields are
  optional in the TS type so future schema tweaks don't break the
  render.
- 5-item cap chosen so the sidebar card doesn't grow unbounded. If a
  loop accumulates a lot of reorders, follow-up UI can render the full
  history on the loop detail page.
2026-07-09 19:00:39 -07:00
Omar Sobh a34be33261 loops: N/M INTs progress pill on source-bound loop cards
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Users couldn't see how a research-bound loop was progressing through
its integration plan — the consumed_int_ids state existed in the DB
but nothing surfaced it. Now each loop card in the sidebar shows a
cyan pill "3/8 INTs" + source topic title + a thin progress bar, when
the loop is bound to a research topic.

Backend:
- GET /api/loops/progress — bulk read for every loop with a source
  topic. Returns {loop_id, source_topic_id, source_topic_title,
  source_outcome_version, consumed_count, total_int_count,
  current_int_index} per loop. Standalone loops are omitted.
- count_int_ids parses unique INT-<number> ids out of the source
  outcome's markdown — same permissive matcher as the completion
  hook, so what the pill counts matches what the loop can advance.
- Memoized by topic_id inside the endpoint so N loops sharing 1
  source topic only fetch the outcome once.

Frontend:
- listLoopProgress helper + LoopProgress type in the loops API.
- LoopsList fetches loops + progress in parallel on mount.
- Each card looks up progress by loop_id and, when found, renders
  under the schedule line: pill "3/8 INTs · Topic title" with a
  3px cyan progress bar. Title hover shows artifact version.

Follow-ups:
- Refresh button on the card — re-snapshot artifact into
  task_template (cosmetic; the enqueue path already reads latest).
- Reorder rationale extraction — parse "REORDER: <text>" out of run
  output, index as a per-loop event log for a mini-timeline UI.
2026-07-09 18:57:09 -07:00
Omar Sobh ce73abe5ab loops: bridge research artifact into loop iterations (option C + b)
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The bridge lets a coding loop "consume" an integrations research
artifact one INT-XX item per iteration. Options b (order-sequential
iteration) and C (snapshot in task_template + save the pointer for
future refresh) from the design discussion.

Migration 0042 — three new loops columns:
- source_research_topic_id — nullable pointer to research_topics.
- consumed_int_ids TEXT[]   — INT-XX ids the loop has completed.
  Advances when topology_worker parses "COMPLETED: INT-<NN>" markers
  from the run's final output (wired in a follow-up commit).
- current_int_index INT     — monotonic pointer for order-sequential
  iteration. Coordinator addresses INT-<current+1> unless prereqs are
  unmet, in which case it works on the smallest unblocking INT-XX and
  logs the reorder rationale.

Backend:
- cm_db::repo::loops::set_source_research_topic — bind/unbind pointer.
- cm_db::repo::loops::source_research_context   — read pointer + state.
- routes::loops::compose_iteration_task         — new caller-side helper
  that reads the pointer, fetches the topic's latest research_outcome,
  and prepends the artifact + focus instruction to task_template.
- run_now + webhook_receive both pass task_template through
  compose_iteration_task before enqueue. Standalone loops (no pointer)
  behave identically to before.
- CreateLoopRequest accepts `source_research_topic_id`, ownership-
  checked via research_topics::get before persist.

Frontend:
- New ResearchArtifactPicker modal — lists published topics, fetches
  the artifact on pick, returns (topic_id, markdown) to caller.
- LoopsWizard task_template step gains "Import from research artifact"
  button (right-aligned). Click opens the picker. On pick: task
  populates with the artifact markdown, pointer saved, textarea
  expands to 8 rows, small info strip shows "Loop is bound to topic
  <id>. Each iteration will focus on the next unconsumed INT-XX."
- Unlink button reverts to standalone loop mode.

Follow-up (next commit):
- topology_worker completion hook — parse "COMPLETED: INT-<NN>" out
  of the run's final output + update consumed_int_ids +
  current_int_index atomically. Without this, current_int_index stays
  at 0 forever and every iteration works on the same INT.
- Loop card refresh button — re-read source topic's latest outcome
  (useful after a reject-with-revision cycle on the source topic).
2026-07-09 18:47:17 -07:00
Omar Sobh 3ed1d03d2b research: integrations outcome + rich wizard cards + coordinator template
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Adds a fifth outcome kind ('integrations') tuned for the "audit repo,
survey papers, propose a menu of concrete integrations" use case.
Every INT-XX item is self-contained (what, how, where, prereqs, effort,
risk, testing, rollback, acceptance) so a downstream loop can execute
one per iteration.

Backend:
- Migration 0041 drops + re-adds the outcome_kind CHECK constraint
  with 'integrations' allowed. Existing rows unaffected.
- VALID_OUTCOMES gains 'integrations'.
- New deliverable_template(kind) returns the canonical section shape
  for each outcome — spec, prod_plan, roadmap, paper, integrations all
  get first-class treatment (prior: all shared a bare label).
- build_coordinator_task injects an ARTIFACT SHAPE block from the
  template into the coordinator prompt, so the final synthesis
  actually matches the promise the wizard made.

Frontend:
- OutcomeKind gains 'integrations'.
- ResearchWizard OUTCOMES list carries a `sections` array per kind.
- Selected card renders an "ARTIFACT WILL CONTAIN" preview so users
  pick by seeing what they'll get, not by reading a one-line hint.
- Integrations card gets the fullest preview (executive summary +
  INT-XX card shape) since it's the most structured deliverable.

Follow-ups queued (next commit): loop wizard "Import from research
artifact" bridge + one-INT-per-iteration mode.
2026-07-09 18:42:46 -07:00
Omar Sobh cca6e2be20 research: pipeline diagnostics + refuse publish without outcome
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Two fixes surfaced by the first prod run of the pipeline:

1) Silent skip-to-published bug (R1 gap):
   approve_publish transitioned reviewing → publishing → published
   without checking that an outcome existed. Result: pipeline could
   fail silently (LLM auth error, network, etc), no outcome would be
   written, but state advanced to 'published' and the download endpoint
   returned 404 with no user-visible error. Now refuses with 409
   Conflict when no outcome exists so the frontend can surface WHY.

2) No end-to-end visibility:
   Users had no way to see where a run failed until they clicked
   Download and got nothing. Adds
   GET /api/research/:id/pipeline-state — a read-only per-stage report
   walking:
     - staffing (agents assigned)
     - repo (bound + cloned)
     - container (per-topic team runtime spawned)
     - runs (count + failed count + latest error text)
     - outcomes (count — the artifact rows get_artifact reads)
     - approval (pending flag)
   Each stage returns ok / warn / fail / skip plus optional detail text
   so the failure reason surfaces at the diagnostic level.

Frontend:
   ResearchCanvas shows a compact PIPELINE strip below the topic title,
   green/amber/red dots per stage, click to expand a full checklist
   with per-stage detail (including the LLM error from the last run
   attempt). Polls every 6s while the topic is processing/publishing.

Follow-up:
   - Root cause of the specific failure just observed: Claude CLI in
     the clawmates-runtime container isn't authenticated. Deploy-side
     config sweep (CLAUDE_CODE_OAUTH_TOKEN or ANTHROPIC_API_KEY into
     the runtime image env), not a code fix.
   - Structured event stream on top of run_events for real per-step
     replay in the diagnostic panel.
2026-07-09 16:59:59 -07:00
Omar Sobh 1896b78cb7 research: pending-approvals inbox in the sidebar (R3)
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Before: reviewers only saw a topic was awaiting them if they navigated
directly to it — the approval CTA lived inside ResearchCanvas. If
someone had 5 topics reviewing, they had to click through each to find
which were staffed for their signoff.

Adds a compact inbox strip at the top of the Research sidebar (right
below the header, above the topic list). Only shown when there's at
least one pending publish approval in the workspace:

- Amber pill: "<count> PENDING REVIEW(s)" with a badge, click to
  expand.
- Expanded state: one row per pending approval, showing the topic
  title (looked up from the already-fetched topics list) and a
  "review →" affordance. Row click selects the topic (fires onSelect
  with the topic_id) so the reviewer lands on the ResearchCanvas with
  the approve/reject controls surfaced.
- Load piggybacks on the existing list-fetch effect via
  Promise.all([listTopics, listPendingApprovals]). Refreshes on the
  same bump + polling triggers, so approvals appear/disappear as
  people request/decide them.

Fetch failure for approvals silently degrades to an empty list — the
sidebar still renders the topic list normally.

Follow-up: filter by reviewer role (currently shows all approvals in
the workspace); notification badge on the top nav so the inbox is
discoverable even when someone is elsewhere in the app.
2026-07-09 15:57:45 -07:00
Omar Sobh e3011ed025 research: reject-with-revision loop (R2)
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Before: reviewer rejected a publish → audit log flipped, topic stayed
in reviewing, no way to feed the critique back into the run pipeline.
Reviewers with revision notes had to eat them or hand-message the
coordinator.

Now: reject accepts an optional `notes` field. When present:
- Persisted on the research_publish_approvals row (migration 0039).
- Topic flips `reviewing → standby` so the next `start_topic` is legal.
- `start_topic` reads the most recent rejected-approval notes for the
  topic and prepends "PRIOR REVIEW NOTES (address these in this
  revision):\n<notes>\n---" to the coordinator task.

Loop closes through the same run pipeline — no new spawn code path,
which means the reviewer's guidance flows through the same
topology_worker, run_events, outcome-writer chain and lands as a fresh
research_outcomes row (versioned, prior drafts preserved). No notes on
reject = legacy behavior (topic stays in reviewing, publish requests
still allowed).

Migration 0039 adds nullable `notes TEXT` to
research_publish_approvals. `decide()` gains a `notes: Option<&str>`
parameter (only one caller, updated inline). New
`latest_rejection_notes(pool, topic_id)` helper for start_topic.

Frontend:
- rejectPublish(id, notes?) now sends a JSON body when notes are
  provided.
- ResearchCanvas reject button opens an inline form with a textarea +
  Cancel/"Send back for revision" pair. Empty notes → plain reject.
- Button label switches: "Send back for revision" when notes present,
  "Reject without notes" when empty.

Follow-up:
- Notes shown in the review UI on the resulting draft so the next
  reviewer sees what changed.
- Multiple rejection rounds — currently only the LATEST rejection's
  notes surface. Accumulating history is a schema-only tweak.
2026-07-09 15:56:16 -07:00
Omar Sobh 4831033910 world: fade landmark orbs after 60s idle (V5)
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Turns out V5 wasn't a no-op — the SSE loop stops emitting a repo:<id>
node once its topic transitions to 'published' (the query filters on
processing/reviewing/publishing), but the client engine's idle-fade
only applied to service/event tiers. Repo and loop landmarks lingered
forever on the client until page reload.

Extends the fade rule to cover repo + loop tiers, with a longer window
(60s vs 22s for service/event) so a brief SSE hiccup doesn't wipe the
whole workspace's landmarks. When a topic reaches 'published', its
`lastSeen` stops advancing on the client; ~60s later the alpha ramps
down and the node is deleted from the map.

Same rule applies to loops that get `enabled=false` after being
turned off — their landmark quietly fades out instead of persisting
until reload.
2026-07-09 15:52:01 -07:00
Omar Sobh 959e766e36 world: per-file heat map — persistent touch-count residual (V4)
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Files that see repeated touches decay back to visual silence within a
couple of seconds because `n.heat` decays at 0.5/sec. Hard to tell a
hot-spot file (touched 20 times over a run) from a virgin one; both
look the same at rest.

Adds a monotonically-increasing per-node `touchCount` on the engine
and a log-scaled residual on the render that never decays. Files
climbing the touch count grow subtly, tint whiter, and pull more
emissive — even at heat=0.

- GNode gains `touchCount`, initialized 0 on ensureNode and on the
  ROOT sentinel.
- onTouch bumps `touchCount` only for `file:` prefix nodes so
  landmarks + structural orbs don't accumulate a hot halo just because
  agents converge on them.
- WorldCanvas node loop computes `residual = min(0.7, log(1+count)/log(50))`
  and adds it into radius, whiten-lerp, and emissiveIntensity.

Feel: hot files stay softly-warm indefinitely (residual stops climbing
around ~50 touches). Cold files stay cold. Live activity still dominates
via the transient `heat` bump; residual is the ghost trail.
2026-07-09 15:51:21 -07:00
Omar Sobh a49cf86623 world: pre-seed repo tree on clone (V3)
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Repo focus mode used to open into an empty tree — the file/dir nodes
only synthesized as agents touched files via tool calls. Cold-start
users saw a lonely repo:<id> orb with nothing under it. Now the tree
pre-seeds from the actual cloned repo the moment a client subscribes.

Backend:
- active_research_topics also returns repo_workspace_path.
- preseed_repo_paths(clone_path) runs `git ls-files` (bounded to top 200)
  against the on-disk clone. Silently returns empty on any failure so a
  missing clone / git-off-PATH / empty repo just degrades to the pre-V3
  behavior (tree still builds on touch).
- SSE loop, on first sight of a topic per client, emits one
  node.activity per pre-seeded path (label = leaf name, heat 0) so the
  tree is quiet-solid at rest.

Frontend:
- engine.onNodeActivity now synthesizes the dir:<partial> chain for
  file: nodeIds the same way onTouch does — otherwise the pre-seed
  would render as flat leaves under ROOT.
- Same 5-line synthesis extracted from onTouch; both paths now agree on
  the layout.

Cap of 200 keeps the SSE payload bounded on huge repos; the tail fills
in as agents actually touch files. When we later add per-file heat map
(V4), the 200 already-known files get first-class treatment out of the
gate.
2026-07-09 15:49:43 -07:00