Root cause: claude CLI in the per-topic research container runs as
uid=0(root). ZeroClaw's claude_cli provider passes
--dangerously-skip-permissions which Claude CLI rejects under root
for security — so the CLI hangs waiting for interactive permission
approval that never arrives, hitting the 600s provider timeout with
zero step records journaled.
Three-part fix:
1. Claude settings bind-mount (research_container.rs):
Optional CLAWMATES_CLAUDE_SETTINGS_PATH env — when set, mount the
host file at /root/.claude/settings.json (read-only) in every
spawned team container. deploy/claude-settings.json ships the
canonical config (permissions.defaultMode = bypassPermissions +
hasCompletedOnboarding). CLI accepts requests immediately with no
--dangerously-skip-permissions flag needed.
2. Verbose per-step log line (topology_worker.rs):
Every checkpoint now writes to stderr:
topology_worker::step run_id=X step=N node=Y role=Z phase=W
output_bytes=B tokens=T gated=G
Visible in docker logs clawmates_server_1 — gives us live
'topology is flowing' signal without opening the canvas, and
makes it obvious when a topology_kind is skipping stages it
shouldn't.
3. Stuck-container reaper (topology_worker.rs):
New 60s-tick loop reap_stuck_runs: for any research topology_run
older than 15 min with zero checkpoint.records, docker-stop its
container and mark the run failed with a diagnostic error. Only
reaps research-bound runs (non-research runs don't own a
container). The existing 180s stale-checkpoint requeuer stays
in place for other failure modes.
Deploy: gw-04 needs
ln -sf /path/to/repo/deploy/claude-settings.json /opt/clawmates/claude-settings.json
CLAWMATES_CLAUDE_SETTINGS_PATH=/opt/clawmates/claude-settings.json
in the server env, plus the timeout lowered from 600 -> 120 in
compose. Both handled in the deploy step outside this commit.